Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 HTR5BP-201ENST00000430851 1154 ntBASIC16.18■□□□□ 0.18
CAPN1P07384 MKNK2P1-201ENST00000437526 628 ntBASIC16.18■□□□□ 0.18
CAPN1P07384 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN1P07384 AC107918.2-201ENST00000530817 355 ntBASIC16.18■□□□□ 0.18
CAPN1P07384 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPN1P07384 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CAPN1P07384 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN1P07384 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPN1P07384 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
CAPN1P07384 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 AC025580.3-201ENST00000617932 1424 ntBASIC16.18■□□□□ 0.18
CAPN1P07384 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPN1P07384 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPN1P07384 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CAPN1P07384 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CAPN1P07384 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CAPN1P07384 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN1P07384 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN1P07384 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN1P07384 CXCL1P1-201ENST00000502804 216 ntBASIC16.17■□□□□ 0.18
CAPN1P07384 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN1P07384 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.17■□□□□ 0.18
CAPN1P07384 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CAPN1P07384 CYP2A7P1-201ENST00000595391 815 ntBASIC16.17■□□□□ 0.18
CAPN1P07384 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPN1P07384 AL078644.1-201ENST00000609881 752 ntBASIC16.17■□□□□ 0.18
CAPN1P07384 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPN1P07384 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.17■□□□□ 0.18
CAPN1P07384 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN1P07384 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CAPN1P07384 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN1P07384 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CAPN1P07384 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CAPN1P07384 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN1P07384 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN1P07384 AL353732.1-201ENST00000569618 1459 ntBASIC16.16■□□□□ 0.18
CAPN1P07384 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN1P07384 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN1P07384 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN1P07384 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.16■□□□□ 0.18
CAPN1P07384 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN1P07384 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.16■□□□□ 0.18
CAPN1P07384 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.16■□□□□ 0.18
CAPN1P07384 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CAPN1P07384 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CAPN1P07384 PMS2P2-201ENST00000425039 1128 ntBASIC16.16■□□□□ 0.18
CAPN1P07384 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.16■□□□□ 0.18
CAPN1P07384 FAM185BP-201ENST00000443595 716 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms