Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 KRT126P-201ENST00000549467 1181 ntBASIC14.8□□□□□ -0.04
HLA-DPB1P04440 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.8□□□□□ -0.04
HLA-DPB1P04440 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 SART3-203ENST00000546611 1184 ntBASIC14.79□□□□□ -0.04
HLA-DPB1P04440 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 RN7SL510P-201ENST00000581311 263 ntBASIC14.79□□□□□ -0.04
HLA-DPB1P04440 SIGLEC16-201ENST00000599858 1437 ntBASIC14.79□□□□□ -0.04
HLA-DPB1P04440 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPB1P04440 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 AC073592.4-201ENST00000623827 446 ntBASIC14.78□□□□□ -0.04
HLA-DPB1P04440 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 AC013268.4-201ENST00000637413 2228 ntBASIC14.78□□□□□ -0.04
HLA-DPB1P04440 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPB1P04440 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms