Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
APOC3P02656 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 AC140479.7-201ENST00000636301 2332 ntBASIC13.17□□□□□ -0.3
APOC3P02656 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
APOC3P02656 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC3P02656 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC3P02656 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC3P02656 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
APOC3P02656 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
APOC3P02656 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC3P02656 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC3P02656 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC3P02656 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC3P02656 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC3P02656 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
APOC3P02656 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC3P02656 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
APOC3P02656 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC3P02656 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
APOC3P02656 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
APOC3P02656 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
APOC3P02656 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
APOC3P02656 GGT3P-204ENST00000453783 1664 ntBASIC13.15□□□□□ -0.3
APOC3P02656 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
APOC3P02656 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.15□□□□□ -0.3
APOC3P02656 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 AC004899.2-201ENST00000622993 3860 ntBASIC13.15□□□□□ -0.3
APOC3P02656 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.15□□□□□ -0.3
APOC3P02656 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOC3P02656 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
APOC3P02656 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms