Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TIMP1P01033 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.45■□□□□ 0.38
TIMP1P01033 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.45■□□□□ 0.38
TIMP1P01033 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 AC093433.1-201ENST00000458048 571 ntBASIC17.45■□□□□ 0.38
TIMP1P01033 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.45■□□□□ 0.38
TIMP1P01033 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 KRT90P-201ENST00000549264 1064 ntBASIC17.45■□□□□ 0.38
TIMP1P01033 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.45■□□□□ 0.38
TIMP1P01033 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.45■□□□□ 0.38
TIMP1P01033 AP001063.1-201ENST00000568332 529 ntBASIC17.45■□□□□ 0.38
TIMP1P01033 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.45■□□□□ 0.38
TIMP1P01033 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.45■□□□□ 0.38
TIMP1P01033 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.45■□□□□ 0.38
TIMP1P01033 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TIMP1P01033 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.45■□□□□ 0.38
TIMP1P01033 KRT8P37-201ENST00000451609 1420 ntBASIC17.45■□□□□ 0.38
TIMP1P01033 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TIMP1P01033 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP1P01033 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.45■□□□□ 0.38
TIMP1P01033 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 LINC01144-201ENST00000626198 1710 ntBASIC17.44■□□□□ 0.38
TIMP1P01033 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TIMP1P01033 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.44■□□□□ 0.38
TIMP1P01033 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TIMP1P01033 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TIMP1P01033 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.44■□□□□ 0.38
TIMP1P01033 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.44■□□□□ 0.38
TIMP1P01033 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TIMP1P01033 AC106760.1-201ENST00000508690 800 ntBASIC17.44■□□□□ 0.38
TIMP1P01033 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP1P01033 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.44■□□□□ 0.38
TIMP1P01033 AP001258.2-201ENST00000529891 490 ntBASIC17.44■□□□□ 0.38
TIMP1P01033 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TIMP1P01033 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP1P01033 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.44■□□□□ 0.38
TIMP1P01033 AL049840.4-201ENST00000602422 811 ntBASIC17.44■□□□□ 0.38
TIMP1P01033 AC106872.11-201ENST00000605838 421 ntBASIC17.44■□□□□ 0.38
TIMP1P01033 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TIMP1P01033 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TIMP1P01033 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TIMP1P01033 AC006538.1-201ENST00000567905 1585 ntBASIC17.44■□□□□ 0.38
TIMP1P01033 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 MSTO2P-201ENST00000314835 1709 ntBASIC17.44■□□□□ 0.38
TIMP1P01033 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP1P01033 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP1P01033 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.44■□□□□ 0.38
TIMP1P01033 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.43■□□□□ 0.38
TIMP1P01033 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 SLC25A24P2-201ENST00000415059 510 ntBASIC17.43■□□□□ 0.38
TIMP1P01033 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TIMP1P01033 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMP1P01033 CALR4P-201ENST00000431943 946 ntBASIC17.43■□□□□ 0.38
TIMP1P01033 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms