Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CLPXO76031 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.95□□□□□ -0.02
CLPXO76031 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLPXO76031 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.95□□□□□ -0.02
CLPXO76031 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.95□□□□□ -0.02
CLPXO76031 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.95□□□□□ -0.02
CLPXO76031 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 AC020658.6-201ENST00000623564 1870 ntBASIC14.95□□□□□ -0.02
CLPXO76031 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLPXO76031 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 KRT89P-201ENST00000620027 1478 ntBASIC14.95□□□□□ -0.02
CLPXO76031 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.95□□□□□ -0.02
CLPXO76031 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLPXO76031 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 HBZP1-201ENST00000354915 429 ntBASIC14.94□□□□□ -0.02
CLPXO76031 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 HCG4P8-203ENST00000443049 980 ntBASIC14.94□□□□□ -0.02
CLPXO76031 AC092597.1-201ENST00000487352 616 ntBASIC14.94□□□□□ -0.02
CLPXO76031 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 ZNF444P1-201ENST00000559497 298 ntBASIC14.94□□□□□ -0.02
CLPXO76031 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.94□□□□□ -0.02
CLPXO76031 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.94□□□□□ -0.02
CLPXO76031 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLPXO76031 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLPXO76031 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLPXO76031 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLPXO76031 GGT3P-204ENST00000453783 1664 ntBASIC14.93□□□□□ -0.02
CLPXO76031 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.93□□□□□ -0.02
CLPXO76031 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.93□□□□□ -0.02
CLPXO76031 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.93□□□□□ -0.02
CLPXO76031 AC097637.2-201ENST00000624096 1997 ntBASIC14.93□□□□□ -0.02
CLPXO76031 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CLPXO76031 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLPXO76031 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms