Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GMDSO60547 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.57□□□□□ -0.08
GMDSO60547 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GMDSO60547 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.57□□□□□ -0.08
GMDSO60547 ME2P1-201ENST00000426028 1970 ntBASIC14.57□□□□□ -0.08
GMDSO60547 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.57□□□□□ -0.08
GMDSO60547 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GMDSO60547 KRT18P27-201ENST00000427733 1299 ntBASIC14.57□□□□□ -0.08
GMDSO60547 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.57□□□□□ -0.08
GMDSO60547 AC136632.2-201ENST00000512891 861 ntBASIC14.57□□□□□ -0.08
GMDSO60547 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.57□□□□□ -0.08
GMDSO60547 AL662844.1-201ENST00000546340 181 ntBASIC14.57□□□□□ -0.08
GMDSO60547 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.57□□□□□ -0.08
GMDSO60547 AC105339.3-201ENST00000560043 636 ntBASIC14.57□□□□□ -0.08
GMDSO60547 AC104692.2-201ENST00000603054 253 ntBASIC14.57□□□□□ -0.08
GMDSO60547 GGTLC5P-201ENST00000617623 998 ntBASIC14.57□□□□□ -0.08
GMDSO60547 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
GMDSO60547 AL805961.1-202ENST00000641562 540 ntBASIC14.57□□□□□ -0.08
GMDSO60547 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.57□□□□□ -0.08
GMDSO60547 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.57□□□□□ -0.08
GMDSO60547 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.57□□□□□ -0.08
GMDSO60547 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GMDSO60547 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.57□□□□□ -0.08
GMDSO60547 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.57□□□□□ -0.08
GMDSO60547 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.57□□□□□ -0.08
GMDSO60547 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.57□□□□□ -0.08
GMDSO60547 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GMDSO60547 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 AL365209.1-201ENST00000624418 6473 ntBASIC14.57□□□□□ -0.08
GMDSO60547 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GMDSO60547 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 AC006538.1-201ENST00000567905 1585 ntBASIC14.56□□□□□ -0.08
GMDSO60547 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 LINC00895-201ENST00000629028 1637 ntBASIC14.56□□□□□ -0.08
GMDSO60547 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 PTCHD3P3-201ENST00000403073 906 ntBASIC14.56□□□□□ -0.08
GMDSO60547 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.56□□□□□ -0.08
GMDSO60547 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 AP002469.2-201ENST00000531724 424 ntBASIC14.56□□□□□ -0.08
GMDSO60547 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.56□□□□□ -0.08
GMDSO60547 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.56□□□□□ -0.08
GMDSO60547 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.56□□□□□ -0.08
GMDSO60547 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GMDSO60547 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GMDSO60547 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GMDSO60547 AC006504.4-201ENST00000592118 1568 ntBASIC14.56□□□□□ -0.08
GMDSO60547 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMDSO60547 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.55□□□□□ -0.08
GMDSO60547 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMDSO60547 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GMDSO60547 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GMDSO60547 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GMDSO60547 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms