Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC125807.1-201ENST00000483097 614 ntBASIC16.98■□□□□ 0.31
MSI1O43347 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.98■□□□□ 0.31
MSI1O43347 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.98■□□□□ 0.31
MSI1O43347 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 DUX4L27-201ENST00000554796 1261 ntBASIC16.98■□□□□ 0.31
MSI1O43347 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.98■□□□□ 0.31
MSI1O43347 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.98■□□□□ 0.31
MSI1O43347 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.98■□□□□ 0.31
MSI1O43347 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MSI1O43347 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MSI1O43347 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MSI1O43347 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSI1O43347 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
MSI1O43347 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 REXO1L8P-201ENST00000604378 1897 ntBASIC16.97■□□□□ 0.31
MSI1O43347 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MSI1O43347 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.97■□□□□ 0.31
MSI1O43347 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.97■□□□□ 0.31
MSI1O43347 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.97■□□□□ 0.31
MSI1O43347 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.97■□□□□ 0.31
MSI1O43347 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.97■□□□□ 0.31
MSI1O43347 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.97■□□□□ 0.31
MSI1O43347 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.97■□□□□ 0.31
MSI1O43347 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.97■□□□□ 0.31
MSI1O43347 AC051619.7-201ENST00000568314 623 ntBASIC16.97■□□□□ 0.31
MSI1O43347 AL355385.1-201ENST00000606123 409 ntBASIC16.97■□□□□ 0.31
MSI1O43347 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MSI1O43347 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 AC008894.3-201ENST00000624324 3103 ntBASIC16.97■□□□□ 0.31
MSI1O43347 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MSI1O43347 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
MSI1O43347 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSI1O43347 U82695.1-201ENST00000635752 1889 ntBASIC16.97■□□□□ 0.31
MSI1O43347 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MSI1O43347 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.96■□□□□ 0.31
MSI1O43347 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.96■□□□□ 0.31
MSI1O43347 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MSI1O43347 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.96■□□□□ 0.31
MSI1O43347 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.96■□□□□ 0.31
MSI1O43347 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.96■□□□□ 0.31
MSI1O43347 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.96■□□□□ 0.31
MSI1O43347 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MSI1O43347 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
MSI1O43347 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.96■□□□□ 0.31
MSI1O43347 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.96■□□□□ 0.31
MSI1O43347 KLF2P3-201ENST00000451977 1087 ntBASIC16.96■□□□□ 0.31
MSI1O43347 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
MSI1O43347 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.96■□□□□ 0.31
MSI1O43347 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
MSI1O43347 AC015911.4-201ENST00000588022 1070 ntBASIC16.96■□□□□ 0.31
MSI1O43347 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
MSI1O43347 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
MSI1O43347 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSI1O43347 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms