Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.6■□□□□ 0.09
CASQ2O14958 AC128676.1-201ENST00000454392 318 ntBASIC15.6■□□□□ 0.09
CASQ2O14958 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.6■□□□□ 0.09
CASQ2O14958 AC034232.1-201ENST00000506026 1064 ntBASIC15.6■□□□□ 0.09
CASQ2O14958 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.6■□□□□ 0.09
CASQ2O14958 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.6■□□□□ 0.09
CASQ2O14958 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CASQ2O14958 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.6■□□□□ 0.09
CASQ2O14958 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.6■□□□□ 0.09
CASQ2O14958 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CASQ2O14958 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.6■□□□□ 0.09
CASQ2O14958 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.6■□□□□ 0.09
CASQ2O14958 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.6■□□□□ 0.09
CASQ2O14958 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.6■□□□□ 0.09
CASQ2O14958 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
CASQ2O14958 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASQ2O14958 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.6■□□□□ 0.09
CASQ2O14958 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CASQ2O14958 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.59■□□□□ 0.09
CASQ2O14958 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CASQ2O14958 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 ABHD17AP1-201ENST00000358206 933 ntBASIC15.59■□□□□ 0.09
CASQ2O14958 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CASQ2O14958 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CASQ2O14958 AP000523.1-201ENST00000398242 1049 ntBASIC15.59■□□□□ 0.09
CASQ2O14958 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.59■□□□□ 0.09
CASQ2O14958 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.59■□□□□ 0.09
CASQ2O14958 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.59■□□□□ 0.09
CASQ2O14958 FITM1-202ENST00000559294 800 ntBASIC15.59■□□□□ 0.09
CASQ2O14958 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.59■□□□□ 0.09
CASQ2O14958 AC113410.3-201ENST00000623366 203 ntBASIC15.59■□□□□ 0.09
CASQ2O14958 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CASQ2O14958 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.59■□□□□ 0.09
CASQ2O14958 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.59■□□□□ 0.09
CASQ2O14958 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.59■□□□□ 0.09
CASQ2O14958 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASQ2O14958 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.58■□□□□ 0.09
CASQ2O14958 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CASQ2O14958 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CASQ2O14958 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.58■□□□□ 0.09
CASQ2O14958 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.58■□□□□ 0.09
CASQ2O14958 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CASQ2O14958 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CASQ2O14958 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.58■□□□□ 0.08
CASQ2O14958 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.58■□□□□ 0.08
CASQ2O14958 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 AC003669.1-201ENST00000334569 611 ntBASIC15.58■□□□□ 0.08
CASQ2O14958 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
CASQ2O14958 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CASQ2O14958 HLA-F-220ENST00000434407 884 ntBASIC15.58■□□□□ 0.08
CASQ2O14958 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 C2orf69P3-201ENST00000565542 1120 ntBASIC15.58■□□□□ 0.08
CASQ2O14958 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.58■□□□□ 0.08
CASQ2O14958 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms