Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH17O14917 MIR4492-201ENST00000581627 80 ntBASIC15.68■□□□□ 0.1
PCDH17O14917 AC013467.2-201ENST00000605472 835 ntBASIC15.68■□□□□ 0.1
PCDH17O14917 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH17O14917 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH17O14917 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH17O14917 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH17O14917 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH17O14917 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH17O14917 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH17O14917 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDH17O14917 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH17O14917 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH17O14917 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH17O14917 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH17O14917 WASH6P-202ENST00000359512 1437 ntBASIC15.68■□□□□ 0.1
PCDH17O14917 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCDH17O14917 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH17O14917 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PCDH17O14917 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH17O14917 AC004461.1-201ENST00000412461 403 ntBASIC15.67■□□□□ 0.1
PCDH17O14917 TFAMP1-201ENST00000412727 736 ntBASIC15.67■□□□□ 0.1
PCDH17O14917 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH17O14917 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
PCDH17O14917 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDH17O14917 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH17O14917 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH17O14917 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH17O14917 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH17O14917 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH17O14917 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDH17O14917 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDH17O14917 AC103702.1-201ENST00000548801 2630 ntBASIC15.66■□□□□ 0.1
PCDH17O14917 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH17O14917 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH17O14917 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 AC023141.5-201ENST00000458585 616 ntBASIC15.66■□□□□ 0.1
PCDH17O14917 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH17O14917 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDH17O14917 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.66■□□□□ 0.1
PCDH17O14917 MIR3197-201ENST00000582241 73 ntBASIC15.66■□□□□ 0.1
PCDH17O14917 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDH17O14917 CYP2A7P1-201ENST00000595391 815 ntBASIC15.66■□□□□ 0.1
PCDH17O14917 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDH17O14917 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.66■□□□□ 0.1
PCDH17O14917 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 PAUPAR-201ENST00000630360 2965 ntBASIC15.66■□□□□ 0.1
PCDH17O14917 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDH17O14917 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDH17O14917 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDH17O14917 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms