Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXN3O00409 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FOXN3O00409 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXN3O00409 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXN3O00409 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXN3O00409 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXN3O00409 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXN3O00409 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXN3O00409 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
FOXN3O00409 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXN3O00409 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
FOXN3O00409 AL589702.1-201ENST00000641229 1509 ntBASIC17.52■□□□□ 0.39
FOXN3O00409 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
FOXN3O00409 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXN3O00409 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXN3O00409 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.52■□□□□ 0.39
FOXN3O00409 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
FOXN3O00409 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
FOXN3O00409 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXN3O00409 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXN3O00409 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FOXN3O00409 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
FOXN3O00409 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FOXN3O00409 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
FOXN3O00409 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXN3O00409 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 MIR574-201ENST00000385209 96 ntBASIC17.51■□□□□ 0.39
FOXN3O00409 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FOXN3O00409 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXN3O00409 AC112191.1-201ENST00000523689 701 ntBASIC17.51■□□□□ 0.39
FOXN3O00409 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXN3O00409 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXN3O00409 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.51■□□□□ 0.39
FOXN3O00409 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXN3O00409 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FOXN3O00409 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FOXN3O00409 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXN3O00409 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
FOXN3O00409 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXN3O00409 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
FOXN3O00409 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXN3O00409 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXN3O00409 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 AL162727.3-201ENST00000635661 2787 ntBASIC17.5■□□□□ 0.39
FOXN3O00409 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXN3O00409 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FOXN3O00409 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXN3O00409 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXN3O00409 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FOXN3O00409 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
FOXN3O00409 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXN3O00409 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.5■□□□□ 0.39
FOXN3O00409 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.5■□□□□ 0.39
FOXN3O00409 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXN3O00409 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.5■□□□□ 0.39
FOXN3O00409 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXN3O00409 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
FOXN3O00409 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.5■□□□□ 0.39
FOXN3O00409 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXN3O00409 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms