Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 COX20-201ENST00000366528 568 ntTSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 PARP1-202ENST00000366792 553 ntTSL 3 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AL136162.1-201ENST00000607711 1078 ntBASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AC013268.1-206ENST00000638368 961 ntBASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AC112229.1-201ENST00000639295 961 ntBASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 MYCNOS-205ENST00000641950 531 ntBASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 TCAF1P1-201ENST00000414990 2232 ntBASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 ABCC5-202ENST00000334444 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AC078925.2-201ENST00000624013 1973 ntBASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CHKB-CPT1BH3BT56 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 AC135279.3-201ENST00000610945 1311 ntBASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ADM-208ENST00000534464 1640 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CHKB-CPT1BH3BT56 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms