Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 MIR346-201ENST00000362234 95 ntBASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 MIR4745-201ENST00000577608 62 ntBASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 AC006538.1-201ENST00000567905 1585 ntBASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA2E9PIF3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 FLJ38576-201ENST00000623820 2459 ntBASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 TREML5P-201ENST00000421694 576 ntBASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AC140878.1-201ENST00000565277 250 ntBASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 FO538757.1-201ENST00000623083 1397 ntBASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AGGF1P2-201ENST00000426656 2106 ntBASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 AL671710.1-201ENST00000610245 2349 ntBASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 HLA-A-202ENST00000376806 1854 ntBASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA2E9PIF3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 KRT8P39-201ENST00000396270 1433 ntBASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms