Protein–RNA interactions for Protein: C9JPN9

USP17L12, Ubiquitin carboxyl-terminal hydrolase 17-like protein 12, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L12C9JPN9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 TSPY16P-201ENST00000449843 468 ntBASIC19.26■□□□□ 0.67
USP17L12C9JPN9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 AC020916.1-201ENST00000587762 1774 ntBASIC19.26■□□□□ 0.67
USP17L12C9JPN9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP17L12C9JPN9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 AC026979.3-201ENST00000607315 403 ntBASIC19.25■□□□□ 0.67
USP17L12C9JPN9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 AL136982.4-201ENST00000437689 1740 ntBASIC19.25■□□□□ 0.67
USP17L12C9JPN9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USP17L12C9JPN9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 AL139010.1-201ENST00000454878 894 ntBASIC19.24■□□□□ 0.67
USP17L12C9JPN9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 RN7SL204P-201ENST00000582831 262 ntBASIC19.24■□□□□ 0.67
USP17L12C9JPN9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 AL844908.2-201ENST00000609461 460 ntBASIC19.24■□□□□ 0.67
USP17L12C9JPN9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 AC087499.5-201ENST00000452760 1342 ntBASIC19.24■□□□□ 0.67
USP17L12C9JPN9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP17L12C9JPN9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.23■□□□□ 0.67
USP17L12C9JPN9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms