Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 CNN2P11-201ENST00000429351 262 ntBASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 AC005237.2-201ENST00000434368 219 ntBASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 AC022145.2-201ENST00000598203 171 ntBASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 AC006538.3-201ENST00000612495 578 ntBASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 AC139530.3-201ENST00000620344 690 ntBASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM9A6NGZ8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
SMIM9A6NGZ8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 AC098859.1-201ENST00000502915 1238 ntBASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 KRT8P48-201ENST00000515599 1220 ntBASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 AC024267.1-201ENST00000582320 895 ntBASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 AC084121.4-201ENST00000641598 221 ntBASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 AF228730.8-201ENST00000642140 221 ntBASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMIM9A6NGZ8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms