Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC01546A6NGU7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 PMS2P1-201ENST00000431037 1228 ntBASIC11.55□□□□□ -0.56
LINC01546A6NGU7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.55□□□□□ -0.56
LINC01546A6NGU7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LINC01546A6NGU7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 INTS4P1-201ENST00000438455 1935 ntBASIC11.54□□□□□ -0.56
LINC01546A6NGU7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms