Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 AKAP8P1-201ENST00000434743 1349 ntBASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB13Q9Y5F0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB13Q9Y5F0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 AC005622.1-201ENST00000636801 1703 ntBASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 HTR5BP-201ENST00000430851 1154 ntBASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB13Q9Y5F0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms