Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 AC012645.4-201ENST00000610691 1061 ntBASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 SPTSSB-204ENST00000617024 1292 ntBASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX2IPQ9Y2D8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 FAM220BP-201ENST00000377689 816 ntBASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 PIN1P1-201ENST00000412108 996 ntBASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 NKILA-202ENST00000614771 2598 ntBASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSX2IPQ9Y2D8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 AC011676.5-201ENST00000624864 2660 ntBASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 AC098859.1-201ENST00000502915 1238 ntBASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 AC022144.1-201ENST00000602255 1580 ntBASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSX2IPQ9Y2D8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms