Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 TFAMP1-201ENST00000412727 736 ntBASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.01■□□□□ 0.31
AP4E1Q9UPM8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 PCDHA1-201ENST00000378133 2726 ntBASIC17■□□□□ 0.31
AP4E1Q9UPM8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 MKNK2P1-201ENST00000437526 628 ntBASIC17■□□□□ 0.31
AP4E1Q9UPM8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 RN7SL589P-201ENST00000481268 310 ntBASIC17■□□□□ 0.31
AP4E1Q9UPM8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 FAM86C2P-203ENST00000528684 1004 ntBASIC17■□□□□ 0.31
AP4E1Q9UPM8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4E1Q9UPM8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17■□□□□ 0.31
AP4E1Q9UPM8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 HTR5BP-201ENST00000430851 1154 ntBASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 AL138918.1-201ENST00000568306 659 ntBASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.99■□□□□ 0.31
AP4E1Q9UPM8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms