Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 AL671710.1-201ENST00000610245 2349 ntBASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LIN7CQ9NUP9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 HLA-A-201ENST00000376802 1334 ntBASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 AC024909.3-201ENST00000611513 2257 ntBASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 KRT18P27-201ENST00000427733 1299 ntBASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 POU5F1P6-201ENST00000466990 990 ntBASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 AC136632.2-201ENST00000512891 861 ntBASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 MIR7706-201ENST00000613747 67 ntBASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LIN7CQ9NUP9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 AL031731.1-201ENST00000642131 2094 ntBASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 KRT8P39-201ENST00000396270 1433 ntBASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms