Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C12orf4Q9NQ89 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 AC007191.1-201ENST00000623179 2995 ntBASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 HLA-A-202ENST00000376806 1854 ntBASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
C12orf4Q9NQ89 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 CHCHD2P8-201ENST00000429873 447 ntBASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 AC006058.4-201ENST00000624016 1670 ntBASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C12orf4Q9NQ89 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.35□□□□□ -0.11
C12orf4Q9NQ89 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.35□□□□□ -0.11
C12orf4Q9NQ89 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C12orf4Q9NQ89 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms