Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 CICP6-201ENST00000457191 2729 ntBASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 KRT18P2-201ENST00000447938 1258 ntBASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 AL078644.1-201ENST00000609881 752 ntBASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC40Q9H9A6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 AC092919.2-201ENST00000623631 1645 ntBASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRRC40Q9H9A6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 AL591424.1-201ENST00000442569 1213 ntBASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 RNA5SP416-201ENST00000516838 111 ntBASIC16.65■□□□□ 0.26
LRRC40Q9H9A6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms