Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 AC139887.3-201ENST00000568585 713 ntBASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 CYP2A7P1-201ENST00000595391 815 ntBASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 AC020765.3-201ENST00000613051 740 ntBASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 PI4KAP1-204ENST00000612579 1703 ntBASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
COMMD4Q9H0A8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 AC104640.1-201ENST00000562617 2109 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 RBM17P3-201ENST00000417687 1192 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 AC132008.2-207ENST00000454517 770 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 AC106795.1-205ENST00000512851 1056 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 NKAPP1-205ENST00000585790 367 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 AC138894.3-201ENST00000603787 634 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 AP005117.1-202ENST00000581724 1908 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COMMD4Q9H0A8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 AL353732.1-201ENST00000569618 1459 ntBASIC14.53□□□□□ -0.08
COMMD4Q9H0A8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms