Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 AC135586.1-201ENST00000539323 574 ntBASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 AC104794.3-201ENST00000566840 1248 ntBASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 SPDYE22P-201ENST00000582158 798 ntBASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 AC025048.6-201ENST00000634326 1161 ntBASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC85AQ96PX6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC85AQ96PX6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
CCDC85AQ96PX6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CCDC85AQ96PX6 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.27■□□□□ 0.83
CCDC85AQ96PX6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC85AQ96PX6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC85AQ96PX6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 GGT3P-204ENST00000453783 1664 ntBASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 AC010336.2-201ENST00000564226 506 ntBASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC85AQ96PX6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 AC007541.1-201ENST00000570282 1469 ntBASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 AC011676.5-201ENST00000624864 2660 ntBASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 AC024267.1-201ENST00000582320 895 ntBASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 AL132655.2-201ENST00000596276 594 ntBASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 AC063926.2-201ENST00000623766 1308 ntBASIC20.25■□□□□ 0.83
CCDC85AQ96PX6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms