Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSPG4P5Q96PW8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 AL365203.3-201ENST00000609742 2057 ntBASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 MKNK2P1-201ENST00000437526 628 ntBASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 RN7SL589P-201ENST00000481268 310 ntBASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 AC243562.1-201ENST00000560672 389 ntBASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.87■□□□□ 0.29
CSPG4P5Q96PW8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 AC010491.1-201ENST00000563101 2797 ntBASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 MIR648-201ENST00000385046 94 ntBASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 ACTG1P14-201ENST00000446382 1122 ntBASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 KRT8P48-201ENST00000515599 1220 ntBASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 AC027307.2-201ENST00000591252 911 ntBASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 AC008267.7-201ENST00000624570 1194 ntBASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 FOXO1B-201ENST00000504678 1527 ntBASIC16.86■□□□□ 0.29
CSPG4P5Q96PW8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 AC022188.1-201ENST00000620960 1664 ntBASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CSPG4P5Q96PW8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms