Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ZNF259P1-201ENST00000407656 1365 ntBASIC16.94■□□□□ 0.3
C9orf72Q96LT7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 IGHV3-22-201ENST00000520721 359 ntBASIC16.94■□□□□ 0.3
C9orf72Q96LT7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 KRT18P58-201ENST00000527480 1120 ntBASIC16.94■□□□□ 0.3
C9orf72Q96LT7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 AL139424.1-201ENST00000607572 797 ntBASIC16.94■□□□□ 0.3
C9orf72Q96LT7 AC023511.2-201ENST00000618803 211 ntBASIC16.94■□□□□ 0.3
C9orf72Q96LT7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.94■□□□□ 0.3
C9orf72Q96LT7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 PCGF3-213ENST00000620529 1899 ntBASIC16.93■□□□□ 0.3
C9orf72Q96LT7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 LAGE3P1-201ENST00000425356 484 ntBASIC16.93■□□□□ 0.3
C9orf72Q96LT7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 AC092910.1-201ENST00000482027 1129 ntBASIC16.93■□□□□ 0.3
C9orf72Q96LT7 AC105339.3-201ENST00000560043 636 ntBASIC16.93■□□□□ 0.3
C9orf72Q96LT7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 REXO1L3P-201ENST00000622202 1288 ntBASIC16.93■□□□□ 0.3
C9orf72Q96LT7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf72Q96LT7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AC126177.1-201ENST00000547829 2218 ntBASIC16.92■□□□□ 0.3
C9orf72Q96LT7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AC087163.2-201ENST00000457299 853 ntBASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AC023824.1-201ENST00000562945 2975 ntBASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.92■□□□□ 0.3
C9orf72Q96LT7 AC117500.6-201ENST00000624871 588 ntBASIC16.92■□□□□ 0.3
C9orf72Q96LT7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
C9orf72Q96LT7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms