Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.4■□□□□ 0.22
SHDQ96IW2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHDQ96IW2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SHDQ96IW2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 AC005229.1-201ENST00000392885 409 ntBASIC16.4■□□□□ 0.22
SHDQ96IW2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 AC099336.1-201ENST00000417053 1171 ntBASIC16.4■□□□□ 0.22
SHDQ96IW2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.4■□□□□ 0.22
SHDQ96IW2 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.4■□□□□ 0.22
SHDQ96IW2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SHDQ96IW2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.4■□□□□ 0.22
SHDQ96IW2 PTP4A1P2-201ENST00000546033 454 ntBASIC16.4■□□□□ 0.22
SHDQ96IW2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.4■□□□□ 0.22
SHDQ96IW2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.4■□□□□ 0.22
SHDQ96IW2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.4■□□□□ 0.22
SHDQ96IW2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.4■□□□□ 0.22
SHDQ96IW2 AC244093.1-201ENST00000610837 814 ntBASIC16.4■□□□□ 0.22
SHDQ96IW2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
SHDQ96IW2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SHDQ96IW2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 Z97205.2-201ENST00000564697 1639 ntBASIC16.4■□□□□ 0.22
SHDQ96IW2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.4■□□□□ 0.22
SHDQ96IW2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHDQ96IW2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.4■□□□□ 0.22
SHDQ96IW2 AC135050.7-201ENST00000624508 2218 ntBASIC16.39■□□□□ 0.22
SHDQ96IW2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SHDQ96IW2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 RPL7P3-201ENST00000441388 714 ntBASIC16.39■□□□□ 0.21
SHDQ96IW2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.39■□□□□ 0.21
SHDQ96IW2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.39■□□□□ 0.21
SHDQ96IW2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.39■□□□□ 0.21
SHDQ96IW2 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.39■□□□□ 0.21
SHDQ96IW2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.39■□□□□ 0.21
SHDQ96IW2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.39■□□□□ 0.21
SHDQ96IW2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.39■□□□□ 0.21
SHDQ96IW2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SHDQ96IW2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.39■□□□□ 0.21
SHDQ96IW2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.39■□□□□ 0.21
SHDQ96IW2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.39■□□□□ 0.21
SHDQ96IW2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.39■□□□□ 0.21
SHDQ96IW2 RPSAP52-203ENST00000622976 1023 ntBASIC16.39■□□□□ 0.21
SHDQ96IW2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.39■□□□□ 0.21
SHDQ96IW2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SHDQ96IW2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SHDQ96IW2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.39■□□□□ 0.21
SHDQ96IW2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.39■□□□□ 0.21
SHDQ96IW2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHDQ96IW2 CYP4F24P-201ENST00000586049 1580 ntBASIC16.38■□□□□ 0.21
SHDQ96IW2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SHDQ96IW2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHDQ96IW2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.38■□□□□ 0.21
SHDQ96IW2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SHDQ96IW2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.38■□□□□ 0.21
SHDQ96IW2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.38■□□□□ 0.21
SHDQ96IW2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.38■□□□□ 0.21
SHDQ96IW2 HIST3H2BA-201ENST00000436555 524 ntBASIC16.38■□□□□ 0.21
SHDQ96IW2 AL355864.2-201ENST00000447420 863 ntBASIC16.38■□□□□ 0.21
SHDQ96IW2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 RPL13AP25-201ENST00000484130 612 ntBASIC16.38■□□□□ 0.21
SHDQ96IW2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.38■□□□□ 0.21
SHDQ96IW2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHDQ96IW2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.38■□□□□ 0.21
SHDQ96IW2 AC079316.1-201ENST00000548397 411 ntBASIC16.38■□□□□ 0.21
SHDQ96IW2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHDQ96IW2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.38■□□□□ 0.21
SHDQ96IW2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.38■□□□□ 0.21
SHDQ96IW2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SHDQ96IW2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHDQ96IW2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms