Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC004706.3-202ENST00000621574 984 ntBASIC15.82■□□□□ 0.12
VPS33AQ96AX1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 AF228730.7-201ENST00000641842 219 ntBASIC15.82■□□□□ 0.12
VPS33AQ96AX1 AC073347.1-201ENST00000421633 2643 ntBASIC15.82■□□□□ 0.12
VPS33AQ96AX1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 AC112504.1-201ENST00000623415 1841 ntBASIC15.82■□□□□ 0.12
VPS33AQ96AX1 AP003680.1-201ENST00000598970 3660 ntBASIC15.82■□□□□ 0.12
VPS33AQ96AX1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS33AQ96AX1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 MTDHP4-201ENST00000600287 670 ntBASIC15.81■□□□□ 0.12
VPS33AQ96AX1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.81■□□□□ 0.12
VPS33AQ96AX1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 AC126755.1-201ENST00000525846 6405 ntBASIC15.81■□□□□ 0.12
VPS33AQ96AX1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS33AQ96AX1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 AC006504.4-201ENST00000592118 1568 ntBASIC15.8■□□□□ 0.12
VPS33AQ96AX1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 KRT18P35-201ENST00000510488 1269 ntBASIC15.8■□□□□ 0.12
VPS33AQ96AX1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 AC107918.2-201ENST00000530817 355 ntBASIC15.8■□□□□ 0.12
VPS33AQ96AX1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.8■□□□□ 0.12
VPS33AQ96AX1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms