Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSMEM1Q8WWF3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
SSMEM1Q8WWF3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SSMEM1Q8WWF3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.23
SSMEM1Q8WWF3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 AL645939.2-201ENST00000427340 991 ntBASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 AC005412.3-201ENST00000580309 715 ntBASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 AC026691.1-201ENST00000602502 2017 ntBASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.64□□□□□ -0.23
SSMEM1Q8WWF3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 TSEN15P1-201ENST00000423257 515 ntBASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 AC107918.2-201ENST00000530817 355 ntBASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 RFPL4AP1-201ENST00000530883 850 ntBASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 AL391005.1-201ENST00000623953 2435 ntBASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
SSMEM1Q8WWF3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms