Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.16■□□□□ 0.18
RDH11Q8TC12 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RDH11Q8TC12 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 MIR4515-201ENST00000584082 81 ntBASIC16.15■□□□□ 0.18
RDH11Q8TC12 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RDH11Q8TC12 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RDH11Q8TC12 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.14■□□□□ 0.18
RDH11Q8TC12 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 AKR1C7P-201ENST00000305623 895 ntBASIC16.14■□□□□ 0.17
RDH11Q8TC12 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 RNU1-129P-201ENST00000384064 167 ntBASIC16.14■□□□□ 0.17
RDH11Q8TC12 EMBP1-201ENST00000458200 901 ntBASIC16.14■□□□□ 0.17
RDH11Q8TC12 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 OR7E14P-202ENST00000530490 1290 ntBASIC16.14■□□□□ 0.17
RDH11Q8TC12 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 U1.21-201ENST00000580816 167 ntBASIC16.14■□□□□ 0.17
RDH11Q8TC12 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 RN7SL510P-201ENST00000581311 263 ntBASIC16.14■□□□□ 0.17
RDH11Q8TC12 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 MIR1199-201ENST00000621445 119 ntBASIC16.14■□□□□ 0.17
RDH11Q8TC12 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.14■□□□□ 0.17
RDH11Q8TC12 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RDH11Q8TC12 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms