Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 FAM58DP-201ENST00000428076 619 ntBASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 CNN2P11-201ENST00000429351 262 ntBASIC17.35■□□□□ 0.37
UBA3Q8TBC4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AP000344.2-201ENST00000512987 629 ntBASIC17.35■□□□□ 0.37
UBA3Q8TBC4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AC105233.2-201ENST00000523697 349 ntBASIC17.35■□□□□ 0.37
UBA3Q8TBC4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AF228730.5-201ENST00000530288 346 ntBASIC17.35■□□□□ 0.37
UBA3Q8TBC4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 SLC25A39P2-201ENST00000537614 270 ntBASIC17.35■□□□□ 0.37
UBA3Q8TBC4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AP000842.3-202ENST00000569238 1080 ntBASIC17.35■□□□□ 0.37
UBA3Q8TBC4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 AC073389.1-201ENST00000595595 795 ntBASIC17.35■□□□□ 0.37
UBA3Q8TBC4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.35■□□□□ 0.37
UBA3Q8TBC4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 MIR346-201ENST00000362234 95 ntBASIC17.34■□□□□ 0.37
UBA3Q8TBC4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 AC004835.2-201ENST00000603762 682 ntBASIC17.34■□□□□ 0.37
UBA3Q8TBC4 AC006538.3-201ENST00000612495 578 ntBASIC17.34■□□□□ 0.37
UBA3Q8TBC4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.34■□□□□ 0.37
UBA3Q8TBC4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBA3Q8TBC4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.33■□□□□ 0.37
UBA3Q8TBC4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 AL589702.1-201ENST00000641229 1509 ntBASIC17.33■□□□□ 0.37
UBA3Q8TBC4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBA3Q8TBC4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 AL627223.1-201ENST00000416693 442 ntBASIC17.33■□□□□ 0.36
UBA3Q8TBC4 AC142381.1-201ENST00000426099 345 ntBASIC17.33■□□□□ 0.36
UBA3Q8TBC4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms