Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.49■□□□□ 0.39
LMO3Q8TAP4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AC112482.1-201ENST00000492080 688 ntBASIC17.49■□□□□ 0.39
LMO3Q8TAP4 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AC046158.3-201ENST00000624947 2558 ntBASIC17.49■□□□□ 0.39
LMO3Q8TAP4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LMO3Q8TAP4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 FAM220BP-201ENST00000377689 816 ntBASIC17.48■□□□□ 0.39
LMO3Q8TAP4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 TIMM8BP1-201ENST00000452384 211 ntBASIC17.48■□□□□ 0.39
LMO3Q8TAP4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 KRT8P23-201ENST00000560090 1207 ntBASIC17.48■□□□□ 0.39
LMO3Q8TAP4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.48■□□□□ 0.39
LMO3Q8TAP4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 RPSAP43-201ENST00000402237 625 ntBASIC17.47■□□□□ 0.39
LMO3Q8TAP4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 AC022145.2-201ENST00000598203 171 ntBASIC17.47■□□□□ 0.39
LMO3Q8TAP4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 AC105917.1-201ENST00000506637 2539 ntBASIC17.47■□□□□ 0.39
LMO3Q8TAP4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.47■□□□□ 0.39
LMO3Q8TAP4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LMO3Q8TAP4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LMO3Q8TAP4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
LMO3Q8TAP4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LMO3Q8TAP4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LMO3Q8TAP4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms