Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 MCCD1P2-201ENST00000423228 335 ntBASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 AC091812.2-201ENST00000619081 385 ntBASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDH19Q8TAB3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 AL138918.1-201ENST00000568306 659 ntBASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 AP001160.2-201ENST00000596071 487 ntBASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH19Q8TAB3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PCDH19Q8TAB3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDH19Q8TAB3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDH19Q8TAB3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 ALG1L5P-201ENST00000482043 771 ntBASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 RARRES2P8-201ENST00000566335 367 ntBASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 AC092902.6-201ENST00000641783 218 ntBASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 AC079781.4-201ENST00000641908 219 ntBASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms