Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC148Q8NFR7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC148Q8NFR7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CCDC148Q8NFR7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.62
CCDC148Q8NFR7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AP006288.1-201ENST00000446065 395 ntBASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AC004967.1-201ENST00000453589 447 ntBASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AL138918.1-201ENST00000568306 659 ntBASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC148Q8NFR7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 AL592309.1-201ENST00000443127 649 ntBASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC148Q8NFR7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AC254562.1-201ENST00000417586 456 ntBASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms