Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SETD9Q8NE22 PMPCAP1-201ENST00000508114 1576 ntBASIC15.11■□□□□ 0.01
SETD9Q8NE22 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SETD9Q8NE22 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 AL845331.1-201ENST00000424978 1190 ntBASIC15.1■□□□□ 0.01
SETD9Q8NE22 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 MIR4492-201ENST00000581627 80 ntBASIC15.1■□□□□ 0.01
SETD9Q8NE22 AC090616.6-201ENST00000582640 721 ntBASIC15.1■□□□□ 0.01
SETD9Q8NE22 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.1■□□□□ 0.01
SETD9Q8NE22 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SETD9Q8NE22 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 VENTXP7-201ENST00000475503 772 ntBASIC15.09■□□□□ 0.01
SETD9Q8NE22 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 MPDU1-223ENST00000582151 728 ntBASIC15.09■□□□□ 0.01
SETD9Q8NE22 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.09■□□□□ 0.01
SETD9Q8NE22 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SETD9Q8NE22 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms