Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 AC074386.1-202ENST00000463561 864 ntBASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 AC140658.5-201ENST00000438532 169 ntBASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 AP002472.1-201ENST00000577490 586 ntBASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 AL009183.1-201ENST00000603760 355 ntBASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIMC1Q8NDZ2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.48■□□□□ 0.07
SIMC1Q8NDZ2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms