Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT4Q8N9R6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 MIR648-201ENST00000385046 94 ntBASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 FAM58CP-201ENST00000435741 640 ntBASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 POLD2P1-201ENST00000511220 997 ntBASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 PGAM5P1-201ENST00000518923 814 ntBASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 FAM86C2P-203ENST00000528684 1004 ntBASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CDRT4Q8N9R6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 PMS2P7-201ENST00000506558 1336 ntBASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 PCDHA1-201ENST00000378133 2726 ntBASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 AC004832.2-201ENST00000426397 482 ntBASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 AL365330.1-201ENST00000607459 531 ntBASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDRT4Q8N9R6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms