Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL1Q8N7R7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 UPK3BP1-201ENST00000428678 509 ntBASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 HCG4P8-203ENST00000443049 980 ntBASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 AC091304.2-201ENST00000564639 760 ntBASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 AC025062.2-201ENST00000605477 670 ntBASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNYL1Q8N7R7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 AP003680.1-201ENST00000598970 3660 ntBASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 AC021087.4-201ENST00000563761 564 ntBASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 AC006557.2-201ENST00000592985 1240 ntBASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
CCNYL1Q8N7R7 MIR600HG-201ENST00000449175 5984 ntBASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNYL1Q8N7R7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms