Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 AC069224.1-201ENST00000566372 1715 ntBASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 KRT18P1-202ENST00000452408 1331 ntBASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM42Q8IWZ5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 AP002383.4-201ENST00000442518 975 ntBASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 AL353135.1-201ENST00000606729 504 ntBASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM42Q8IWZ5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 MINOS1P3-201ENST00000457048 203 ntBASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 AP002414.4-201ENST00000589764 1148 ntBASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 AC010654.1-201ENST00000615722 808 ntBASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 AC073592.4-201ENST00000623827 446 ntBASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM42Q8IWZ5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms