Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFX6Q8HWS3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFX6Q8HWS3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.08■□□□□ 0.33
RFX6Q8HWS3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFX6Q8HWS3 AC063926.3-201ENST00000624734 5658 ntBASIC17.08■□□□□ 0.33
RFX6Q8HWS3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
RFX6Q8HWS3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 AC104109.2-201ENST00000602919 1418 ntBASIC17.08■□□□□ 0.32
RFX6Q8HWS3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 PMS2P4-201ENST00000412466 1052 ntBASIC17.08■□□□□ 0.32
RFX6Q8HWS3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 AC132872.4-202ENST00000622924 2756 ntBASIC17.08■□□□□ 0.32
RFX6Q8HWS3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 AL365203.3-201ENST00000609742 2057 ntBASIC17.08■□□□□ 0.32
RFX6Q8HWS3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFX6Q8HWS3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 RHOQP3-201ENST00000437982 621 ntBASIC17.07■□□□□ 0.32
RFX6Q8HWS3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 MIR3909-201ENST00000579518 119 ntBASIC17.07■□□□□ 0.32
RFX6Q8HWS3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 AC023141.13-201ENST00000604991 943 ntBASIC17.07■□□□□ 0.32
RFX6Q8HWS3 PAUPAR-201ENST00000630360 2965 ntBASIC17.07■□□□□ 0.32
RFX6Q8HWS3 AC007064.4-201ENST00000637740 555 ntBASIC17.07■□□□□ 0.32
RFX6Q8HWS3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX6Q8HWS3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX6Q8HWS3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms