Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.9■■□□□ 1.1
NME9Q86XW9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.9■■□□□ 1.1
NME9Q86XW9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NME9Q86XW9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NME9Q86XW9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NME9Q86XW9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.9■■□□□ 1.1
NME9Q86XW9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NME9Q86XW9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NME9Q86XW9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NME9Q86XW9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NME9Q86XW9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NME9Q86XW9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NME9Q86XW9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.89■■□□□ 1.1
NME9Q86XW9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
NME9Q86XW9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
NME9Q86XW9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NME9Q86XW9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NME9Q86XW9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
NME9Q86XW9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
NME9Q86XW9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
NME9Q86XW9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
NME9Q86XW9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NME9Q86XW9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NME9Q86XW9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NME9Q86XW9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NME9Q86XW9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NME9Q86XW9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NME9Q86XW9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
NME9Q86XW9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NME9Q86XW9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.89■■□□□ 1.09
NME9Q86XW9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NME9Q86XW9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.89■■□□□ 1.09
NME9Q86XW9 IGHV3-71-201ENST00000523324 359 ntBASIC21.89■■□□□ 1.09
NME9Q86XW9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.89■■□□□ 1.09
NME9Q86XW9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
NME9Q86XW9 LINC01115-203ENST00000606068 577 ntBASIC21.89■■□□□ 1.09
NME9Q86XW9 AC106886.4-201ENST00000623557 2502 ntBASIC21.89■■□□□ 1.09
NME9Q86XW9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.89■■□□□ 1.09
NME9Q86XW9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
NME9Q86XW9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NME9Q86XW9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NME9Q86XW9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.89■■□□□ 1.09
NME9Q86XW9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.89■■□□□ 1.09
NME9Q86XW9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.89■■□□□ 1.09
NME9Q86XW9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NME9Q86XW9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.89■■□□□ 1.09
NME9Q86XW9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.88■■□□□ 1.09
NME9Q86XW9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.88■■□□□ 1.09
NME9Q86XW9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
NME9Q86XW9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
NME9Q86XW9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 FO393414.2-201ENST00000405153 598 ntBASIC21.88■■□□□ 1.09
NME9Q86XW9 AZGP1P1-201ENST00000411909 902 ntBASIC21.88■■□□□ 1.09
NME9Q86XW9 TMEM14DP-201ENST00000422205 345 ntBASIC21.88■■□□□ 1.09
NME9Q86XW9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.88■■□□□ 1.09
NME9Q86XW9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.88■■□□□ 1.09
NME9Q86XW9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC21.88■■□□□ 1.09
NME9Q86XW9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC21.88■■□□□ 1.09
NME9Q86XW9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.88■■□□□ 1.09
NME9Q86XW9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 AL592424.1-201ENST00000563624 1536 ntBASIC21.88■■□□□ 1.09
NME9Q86XW9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.88■■□□□ 1.09
NME9Q86XW9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
NME9Q86XW9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
NME9Q86XW9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
NME9Q86XW9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.88■■□□□ 1.09
NME9Q86XW9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 AL691432.1-201ENST00000596308 1422 ntBASIC21.88■■□□□ 1.09
NME9Q86XW9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NME9Q86XW9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NME9Q86XW9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.87■■□□□ 1.09
NME9Q86XW9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
NME9Q86XW9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 GPR53P-205ENST00000457298 1084 ntBASIC21.87■■□□□ 1.09
NME9Q86XW9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.87■■□□□ 1.09
NME9Q86XW9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.87■■□□□ 1.09
NME9Q86XW9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.87■■□□□ 1.09
NME9Q86XW9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.87■■□□□ 1.09
NME9Q86XW9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NME9Q86XW9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.87■■□□□ 1.09
NME9Q86XW9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NME9Q86XW9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NME9Q86XW9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms