Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 AL049840.4-201ENST00000602422 811 ntBASIC13.56□□□□□ -0.24
CSMD2Q7Z408 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD2Q7Z408 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AL355864.2-201ENST00000447420 863 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AP006547.1-201ENST00000563435 692 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AC134043.2-201ENST00000624206 2238 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AC009053.2-201ENST00000563701 2365 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 NKAIN1P1-201ENST00000435754 582 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AP003419.4-201ENST00000616071 517 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AC005252.2-201ENST00000624630 1141 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AC016694.1-201ENST00000434179 700 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AC026979.3-201ENST00000607315 403 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 AC138951.2-201ENST00000623455 1161 ntBASIC13.55□□□□□ -0.24
CSMD2Q7Z408 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.55□□□□□ -0.24
CSMD2Q7Z408 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 MTX1P1-201ENST00000440904 838 ntBASIC13.54□□□□□ -0.24
CSMD2Q7Z408 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.54□□□□□ -0.24
CSMD2Q7Z408 AL096828.3-201ENST00000615354 462 ntBASIC13.54□□□□□ -0.24
CSMD2Q7Z408 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD2Q7Z408 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms