Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS6Q7L5N1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 AC027307.3-201ENST00000594262 1100 ntBASIC20.54■□□□□ 0.88
COPS6Q7L5N1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS6Q7L5N1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 OR6D1P-202ENST00000641007 5290 ntBASIC20.53■□□□□ 0.88
COPS6Q7L5N1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 AC026471.1-201ENST00000564629 3026 ntBASIC20.53■□□□□ 0.88
COPS6Q7L5N1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 SPDYE19P-201ENST00000338590 713 ntBASIC20.53■□□□□ 0.88
COPS6Q7L5N1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 HIST3H2BA-201ENST00000436555 524 ntBASIC20.53■□□□□ 0.88
COPS6Q7L5N1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 TP53TG3HP-202ENST00000569755 579 ntBASIC20.53■□□□□ 0.88
COPS6Q7L5N1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 AC004461.2-201ENST00000629517 803 ntBASIC20.53■□□□□ 0.88
COPS6Q7L5N1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 AL109936.8-201ENST00000641772 604 ntBASIC20.53■□□□□ 0.88
COPS6Q7L5N1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS6Q7L5N1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.52■□□□□ 0.88
COPS6Q7L5N1 AL353779.1-201ENST00000434793 351 ntBASIC20.52■□□□□ 0.88
COPS6Q7L5N1 RN7SL692P-201ENST00000464677 288 ntBASIC20.52■□□□□ 0.88
COPS6Q7L5N1 DOC2GP-202ENST00000514950 1163 ntBASIC20.52■□□□□ 0.88
COPS6Q7L5N1 SDHAP3-202ENST00000515467 728 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms