Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXR1Q6PIV2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AC023157.3-201ENST00000619086 2088 ntBASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AL645728.1-201ENST00000366221 2101 ntBASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AC098831.1-202ENST00000438821 336 ntBASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AC010327.4-202ENST00000591484 748 ntBASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AL138831.2-201ENST00000606564 490 ntBASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 AC027601.4-201ENST00000611259 610 ntBASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXR1Q6PIV2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 KRT8P47-201ENST00000604727 1398 ntBASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 AP005117.1-202ENST00000581724 1908 ntBASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 ABCD1P5-201ENST00000445663 754 ntBASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 AC124947.2-201ENST00000547118 1133 ntBASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXR1Q6PIV2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 AC125634.1-201ENST00000438758 1403 ntBASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.15■□□□□ 0.34
FOXR1Q6PIV2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms