Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 COX20P2-201ENST00000452636 358 ntBASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 SERBP1P3-201ENST00000459980 809 ntBASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 AC009407.1-201ENST00000568958 598 ntBASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 AC009118.2-201ENST00000613275 655 ntBASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC27A1Q6PCB7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 RN7SL618P-201ENST00000477850 296 ntBASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 SERBP1P5-201ENST00000510079 1181 ntBASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 ZNF890P-202ENST00000530367 1156 ntBASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 REXO1L8P-201ENST00000604378 1897 ntBASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC27A1Q6PCB7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC27A1Q6PCB7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms