Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 AC016027.1-202ENST00000607927 1699 ntBASIC12.43□□□□□ -0.42
MRPL54Q6P161 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.43□□□□□ -0.42
MRPL54Q6P161 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MRPL54Q6P161 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
MRPL54Q6P161 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.43□□□□□ -0.42
MRPL54Q6P161 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AC007967.3-201ENST00000434308 558 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 STK19B-204ENST00000512515 211 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms