Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL1Q6NVV3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 AL009183.1-201ENST00000603760 355 ntBASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 AL513190.1-201ENST00000621254 727 ntBASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL1Q6NVV3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 YBX2P1-201ENST00000394192 760 ntBASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 AC023274.1-201ENST00000418278 595 ntBASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL1Q6NVV3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms