Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TTC39BQ5VTQ0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 AC079140.1-201ENST00000508039 487 ntBASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 AL596442.2-201ENST00000610240 980 ntBASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 AL671710.1-201ENST00000610245 2349 ntBASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 AC006538.1-201ENST00000567905 1585 ntBASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC39BQ5VTQ0 ALOX12P2-203ENST00000570921 1945 ntBASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 AC004461.1-201ENST00000412461 403 ntBASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 KRT8P48-201ENST00000515599 1220 ntBASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 KRT8P23-201ENST00000560090 1207 ntBASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC39BQ5VTQ0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.08■□□□□ 0.33
TTC39BQ5VTQ0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TTC39BQ5VTQ0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms