Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 HTR5BP-201ENST00000430851 1154 ntBASIC14.34□□□□□ -0.11
FAM27BQ5VT28 DNAJB3-201ENST00000446806 729 ntBASIC14.34□□□□□ -0.11
FAM27BQ5VT28 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 AC098859.1-201ENST00000502915 1238 ntBASIC14.34□□□□□ -0.11
FAM27BQ5VT28 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 AL138918.1-201ENST00000568306 659 ntBASIC14.34□□□□□ -0.11
FAM27BQ5VT28 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 AC026120.1-201ENST00000611536 926 ntBASIC14.34□□□□□ -0.11
FAM27BQ5VT28 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FAM27BQ5VT28 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.11
FAM27BQ5VT28 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
FAM27BQ5VT28 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.33□□□□□ -0.11
FAM27BQ5VT28 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
FAM27BQ5VT28 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM27BQ5VT28 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM27BQ5VT28 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FAM27BQ5VT28 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AC243562.1-201ENST00000560672 389 ntBASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FAM27BQ5VT28 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.32□□□□□ -0.12
FAM27BQ5VT28 SPDYE11-202ENST00000450699 704 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms