Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 AC007326.2-201ENST00000624224 7579 ntBASIC14.74□□□□□ -0.05
CCDC58Q4VC31 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 POM121L3P-201ENST00000419331 1163 ntBASIC14.74□□□□□ -0.05
CCDC58Q4VC31 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 AC096582.2-201ENST00000510860 516 ntBASIC14.74□□□□□ -0.05
CCDC58Q4VC31 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC58Q4VC31 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 AL031731.1-201ENST00000642131 2094 ntBASIC14.73□□□□□ -0.05
CCDC58Q4VC31 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.73□□□□□ -0.05
CCDC58Q4VC31 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 DRAXINP1-201ENST00000437611 948 ntBASIC14.73□□□□□ -0.05
CCDC58Q4VC31 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 KRT17P6-201ENST00000453795 1220 ntBASIC14.73□□□□□ -0.05
CCDC58Q4VC31 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 AL353135.1-201ENST00000606729 504 ntBASIC14.73□□□□□ -0.05
CCDC58Q4VC31 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC58Q4VC31 AC016734.2-201ENST00000624325 1377 ntBASIC14.73□□□□□ -0.05
CCDC58Q4VC31 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC58Q4VC31 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms