Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC023511.2-201ENST00000618803 211 ntBASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRICKLE4Q2TBC4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 UXT-AS1-201ENST00000590504 1525 ntBASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 MIR4321-201ENST00000592276 80 ntBASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 AC055717.3-201ENST00000622967 595 ntBASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PRICKLE4Q2TBC4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 FAM220BP-201ENST00000377689 816 ntBASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 AP006288.1-201ENST00000446065 395 ntBASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 SLC25A39P2-201ENST00000537614 270 ntBASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 AC093520.2-201ENST00000561830 333 ntBASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRICKLE4Q2TBC4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRICKLE4Q2TBC4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PRICKLE4Q2TBC4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.21■□□□□ 0.02
PRICKLE4Q2TBC4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
PRICKLE4Q2TBC4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms